abc

abc

scala

combine

control

console context fileservice internal market module output internal threadprovider workflow desktopgrid egi sshkey sshlogin collection distribution file modifier range batch condor desktopgrid egi gridscale oar pbs sge slurm ssh batch onvariable display file modifier abc directsampling evolution combine csv lhs quasirandom file care container external jvm netlogo netlogo5 netlogo6 scala systemexec template tools udocker csv pattern

evolution

evolution

transition

Imports

scala

file

file

file

ui

message

container

container

ClassUtils

scala

builder

tools

DesktopGridAuthenticationFactory DesktopGridAuthenticationGUI EGIAuthenticationGUI EGIAuthenticationGUIFactory PrivateKeyAuthenticationFactory PrivateKeyAuthenticationGUI LoginAuthenticationFactory LoginAuthenticationGUI

authentication

ssh

Token

authentication

egi

method abc

Val

AccessToken LimitedAccessToken

EventAccumulator

OS

PluginInfo ConfigurationInfo VectorLensDecorator

EGIAuthenticationAPI EGIAuthenticationAPIImpl PrivateKeyAuthenticationAPI PrivateKeyAuthenticationApiImpl LoginAuthenticationAPI LoginAuthenticationApiImpl

ScalaCompilation

PluginInfo

module

DeterministicGA StochasticGA

ContextAggregator AggregationTransition IAggregationTransition StochasticGAIntegration

AggregationTransition

StochasticGAIntegration

Puzzle

Stochastic

SubMoleExecution

DeterministicGenomeProfile StochasticGenomeProfile

ABCPuzzle DeterministicGA StochasticGA

AuthenticationStore ConfigurationInfo stylesheet

AggregationTransition

BundleClassPathBuilder

Authentication

PluginManager

PluginManager

ExecutionJobRegistry

CondorEnvironment

ExecutionJobRegistry

module

Validation

PluginManager

MoleExecution

OpenMOLEAppender ExecutionResult

FromContext

AuthenticationStore FileMessage RunnableTask Context PrototypeSet Val ValType Variable EventAccumulator EventDispatcher MultipleException Expandable ExpandedString ExpandedElement FromContext ScalaWrappedCompilation ToFromContext FileCache FileService ConfigurationFile ConfigurationLocation Preference ReplicaCatalog SerializerService Services IUpdatable ThreadProvider InputOutputBuilder InputOutputConfig Fix UnrolledDomain LocalEnvironment MoleJob Capsule Grouping MasterCapsule MoleExecution MoleExecutionContext MoleJobGroup StrainerCapsule Ticket ToPuzzle ExplicitSampling FactorSampling Sampling ClosureTask EmptyTask ExplorationTask FromContextTask MoleTask ToArrayTask DefaultSet FileList OptionalArgument Block DataChannel Keep Slot ToTransitionParameter Validation NewFile Workspace EGIAuthenticationTest ListDomain UniformDistribution ListFilesDomain ListPathsDomain SelectFileDomain LogRange Range SizeRange StepRange AccessToken CondorEnvironment DesktopGridEnvironment DesktopGridService AvailabilityQuality DIRACEnvironment EGIAuthentication EGIEnvironment EGIWebDAVStorageService JobScript MyProxy P12Certificate LocalStorage LogicalLinkStorage OAREnvironment PBSEnvironment SGEEnvironment SLURMEnvironment LoginPassword PrivateKey SSHAuthentication SSHEnvironment SSHJobService ByGrouping InGrouping ShuffledGrouping OnVariableGrouping DisplayHook ToStringHook AppendToCSVFileHook AppendToFileHook CopyFileHook SaveHook ConditionHook Lenormand LenormandAnalyseTask LenormandSampling SaveABCHook BreedTask Delta DeltaTask ElitismTask FromIslandTask GASeeder Seed GenerateIslandTask Genome Sequence GenomeProfile InitialStateTask NSGA2 PSE ReassignStateRNGTask SavePopulationHook ScalingGenomeTask ScalingPopulationTask TerminationTask ToOffspringTask UniqueGenome WorkflowIntegration WorkflowIntegrationSelector CompleteSampling ConcatenateSampling FilteredSampling RepeatSampling SampleSampling ShuffleSampling TakeSampling ZipSampling ZipWithIndexSampling ZipWithNameSampling CSVSampling LHS SobolSampling CSVSource FileSource ListDirectoriesSource ListFilesSource LoadSource CARETask ExternalBuilder NetLogoFactory NetLogo5Task NetLogo6Task ScalaTask SystemExecTask TemplateFileFromInputTask TemplateFileTask TemplateTask AssignTask FlattenTask MergeTask UDockerTask Case If MasterSlave Sequence Skip Strain Switch While

OS

OS

OS

MarketIndexEntry CARETask

FileService

FileService

FileService

RuntimeSettings

BigDecimalOperations

ConsoleVariables

ValToArrayDecorator ValTypeDecorator

collection

collection

ToolsPackage

collection

AppendToCSVFileHook AppendToCSVFileHookBuilder FilePackage

Imports

ValTypeDecorator ManifestDecoration

ClassUtils

ToolsPackage

FileService

core plugin batch DumyStorage DIRACEnvironment LocalStorage Token

Services ServicesContainer

AuthenticationStore

OpenMOLEREPL

QualityControl

LimitedAccess UnlimitedAccess UsageControl BatchService AvailabilityQuality